Testing the Infinitely Many Genes Model for the Evolution of the Bacterial Core
Genome and Pangenome
R. Eric Collins and Paul Higgs
you can download the R scripts and example files on github: Pangenome Scripts
the pre-print of the manuscript (in revision) can be downloaded here: Pangenome Paper (PDF)
taxonomic data, sequence alignments, and phylogenetic trees can be downloaded
at TreeBASE: Pangenome
Trees